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Глава 12. Будущее древней ДНК

1 J. R. Arnold, W. F. Libby. “Age Determinations by Radiocarbon Content – Checks with Samples of Known Age”, Science 110 (1949): 678–680.

2 C. Renfrew. Before Civilization: The Radiocarbon Revolution and Prehistoric Europe (London: Jonathan Cape, 1973).

3 L. R. Binford. In Pursuit of the Past: Decoding the Archaeological Record (Berkeley: University of California Press, 1983).

4 M. Rasmussen et al. “Ancient Human Genome Sequence of an Extinct Palaeo-Eskimo”, Nature 463 (2010): 757–762; M. Rasmussen et al. “The Genome of a Late Pleistocene Human from a Clovis Burial Site in Western Montana”, Nature 506 (2014): 225–229; M. Raghavan et al. “Upper Palaeolithic Siberian Genome Reveals Dual Ancestry of Native Americans”, Nature (2013): doi: 10.1038/nature 12736.

5 P. Skoglund et al. “Genomic Insights into the Peopling of the Southwest Pacific”, Nature 538 (2016): 510–513.

6 J. Dabney et al. “Complete Mitochondrial Genome Sequence of a Middle Pleistocene Cave Bear Reconstructed from Ultrashort DNA Fragments”, Proceedings of the National Academy of Sciences of the U.S.A. 110 (2013): 15758–15763; M. Meyer et al. “A High-Coverage Genome Sequence from an Archaic Denisovan Individual”, Science 338 (2012): 222–226; Q. Fu et al. “DNA Analysis of an Early Modern Human from Tianyuan Cave, China”, Proceedings of the National Academy of Sciences of the U.S.A. 110 (2013): 2223–2227; R. Pinhasi et al. “Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone”, PLoS One 10 (2015): e0129102.

7 I. Lazaridis et al. “Genomic Insights into the Origin of Farming in the Ancient Near East”, Nature 536 (2016): 419–424.

8 I. Olalde et al. “The Beaker Phenomenon and the Genomic Transformation of Northwest Europe”, bioRxiv (2017): doi. org/10.1101/135962.

9 P. F. Palamara, T. Lencz, A. Darvasi, I. Pe’er. “Length Distributions of Identity by Descent Reveal Fine-Scale Demographic History”, American Journal of Human Genetics 91 (2012): 809–822; D. J. Lawson, G. Hellenthal, S. Myers, D. Falush. “Inference of population structure using dense haplotype data”, PLoS Genetics 8 (2012): e1002453.

10 S. Leslie et al. “The Fine-Scale Genetic Structure of the British Population”, Nature 519 (2015): 309–314.

11 S. R. Browning and B. L. Browning. “Accurate Non-parametric Estimation of Recent Effective Population Size from Segments of Identity by Descent”, American Journal of Human Genetics 97 (2015): 404–418.

12 M. Lynch. “Rate, Molecular Spectrum, and Consequences of Human Mutation”, Proceedings of the National Academy of Sciences of the U.S.A. 107 (2010): 961–968; A. Kong et al. “Selection Against Variants in the Genome Associated with Educational Attainment”, Proceedings of the National Academy of Sciences of the U.S.A. 114 (2017): E727–732.

13 J. K. Pritchard, J. K. Pickrell, G. Coop. “The Genetics of Human Adaptation: Hard Sweeps, Soft Sweeps, and Polygenic Adaptation”, Current Biology 20 (2010): R208–215.

14 S. Haensch et al. “Distinct Clones of Yersinia pestis Caused the Black Death”, PLoS Pathogens 6 (2010): e1001134; K. I. Bos et al. “A Draft Genome of Yersinia pestis from Victims of the Black Death”, Nature 478 (2011): 506–510.

15 I. Wiechmann, G. Grupe. “Detection of Yersinia pestis DNA in Two Early Medieval Skeletal Finds from Aschheim (Upper Bavaria, 6th Century AD)”, American Journal of Physical Anthropology 126 (2005): 48–55; D. M. Wagner et al. “Yersinia pestis and the Plague of Justinian 541–543 AD: A Genomic Analysis”, Lancet Infectious Diseases 14 (2014): 319–326.

16 S. Rasmussen et al. “Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago”, Cell 163 (2015): 571–582.

17 P. Singh et al. “Insight into the Evolution and Origin of Leprosy Bacilli from the Genome Sequence of Mycobacterium lepromatosis”, Proceedings of the National Academy of Sciences of the U.S.A. 112 (2015): 4459–4464.

18 K. I. Bos et al. “Pre-Columbian Mycobacterial Genomes Reveal Seals as a Source of New World Human Tuberculosis”, Nature 514 (2014): 494–497.

19 K. Yoshida et al. “The Rise and Fall of the Phytophthora infestans Lineage That Triggered the Irish Potato Famine”, eLife 2 (2013): e00731.

20 C. Warinner et al. “Pathogens and Host Immunity in the Ancient Human Oral Cavity”, Nature Genetics 46 (2014): 336–344.

21. T. Higham et al. “The Timing and Spatiotemporal Patterning of Neanderthal Disappearance”, Nature 512 (2014): 306–309.

22 E. Callaway. “Ancient Genome Delivers ‘Spirit Cave Mummy’ to US Tribe”, Nature 540 (2016): 178–179.